Bacterial Gastroenteritis Differential Diagnoses
- Author: Jennifer Lynn Bonheur, MD; Chief Editor: Julian Katz, MD more...
Diagnostic Considerations
Conditions to consider in the differential diagnosis of bacterial gastroenteritis include the following:
- Colovesical fistula
- Cholera
- Diverticulitis
- Food allergies
- Food poisoning
- Gardnerella
- Viral gastroenteritis
- Giardiasis
- Isosporiasis
- Lower gastrointestinal bleeding
- Meckel diverticulum
- Microsporidiosis
- Salmonellosis
- Shigellosis
- Short-bowel syndrome
- Ulcerative colitis
Differential Diagnoses
- Adenoviruses
- Amebiasis
- Appendicitis
- Campylobacter Infections
- Celiac Sprue
- Clostridium Difficile Colitis
- Colon Cancer, Adenocarcinoma
- Colonic Polyps
- Crohn Disease
- Cryptosporidiosis
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| Stool Characteristics | Small Bowel | Large Bowel |
| Appearance | Watery | Mucus and/or blood |
| Volume | Large | Small |
| Frequency | Increased | Increased |
| Blood | Possibly heme-positive but never gross blood | Possibly grossly bloody |
| pH | Possibly < 5.5 | >5.5 |
| Reducing substances | Possibly positive | Negative |
| White blood cell (WBC) count | < 5/high-power field (HPF) | Possibly >10/HPF |
| Serum WBC count | Normal | Possible leukocytosis, bandemia |
| Organisms | Preformed toxins: Bacillus species, Staphylococcus aureus | Invasive bacteria: E coli and Shigella, Salmonella, Campylobacter, Yersinia, Aeromonas, and Plesiomonas species |
| Toxic bacteria: E coli, cholera, C perfringens, Vibrio species, Listeria monocytogenes | Toxic bacteria: C difficile | |
| Other causes: rotavirus, adenovirus, calicivirus, astrovirus, Norwalk virus, and Giardia and Cryptosporidium species | Other causes: Entamoeba species |
| Organism | Incubation | Duration | Vomiting | Fever | Abdominal Pain |
| Aeromonas species | None | 0-2 weeks | +/- | +/- | No |
| Bacillus species | 1-16 hours | 1-2 days | Yes | No | Yes |
| Campylobacter species | 2-4 days | 5-7 days | No | Yes | Yes |
| C difficile | Variable | Variable | No | Few | Few |
| C perfringens | 0-1 | 1 day | Mild | No | Yes |
| Enterohemorrhagic E coli | 1-8 days | 3-6 days | No | +/- | Yes |
| Enterotoxigenic E coli | 1-3 days | 3-5 days | Yes | Low | Yes |
| Listeria species | 20 hours | 2 days | Few | Yes | +/- |
| Plesiomonas species | None | 0-2 weeks | +/- | +/- | +/- |
| Salmonella species | 0-3 days | 2-7 days | Yes | Yes | Yes |
| Shigella species | 0-2 days | 2-7 days | No | High | Yes |
| S aureus | 2-6 hours | 1 day | Yes | No | Yes |
| Vibrio species | 0-1 days | 5-7 days | Yes | No | Yes |
| Y enterocolitica | 0-6 | 1-46 days | Yes | Yes | Yes |
| Organism | Detection Method | Microbiologic Characteristics |
| Aeromonas species | Blood agar | Oxidase-positive, flagellated GNB |
| Bacillus species | Blood agar | Facultatively aerobic, spore-forming GPR; beta hemolytic; reduces nitrates; ferments carbohydrates |
| Campylobacter species | Skirrow agar | Rapidly motile, curved GNR; Campylobacter jejuni 90% of infections, Campylobacter coli 5% of infections |
| C difficile | CCFE agar, EIA for toxin, LA for protein | Anaerobic, spore-forming GPR; toxin-mediated diarrhea; produces pseudomembranous colitis |
| C perfringens | None available | Anaerobic, spore-forming GPR; toxin-mediated diarrhea |
| E coli | MacConkey, EMB, or SM agar | Lactose-producing GNR |
| Listeria species | Blood agar | Flagellated GPB |
| Plesiomonas species | Blood agar | Oxidase-positive GNR |
| Salmonella species | Blood, MacConkey, EMB, XLD, or HE agar | Nonlactose, non–H2S-producing GNR |
| Shigella species | Blood, MacConkey, EMB, XLD, or HE agar | Nonlactose and H2S-producing GNR; verotoxin (neurotoxin) |
| Staphylococcus species | Blood agar | Heat-stable, preformed toxin-mediated GPC |
| Vibrio species | Blood or TCBS agar | Oxidase-positive, motile, curved GNB |
| Y enterocolitica | CIN agar | Nonlactose-producing, oval GNR |
| CCFE = cycloserine-cefoxitin-fructose-egg; CIN = cefsulodin-irgasan-novobiocin; EIA= enzyme immunoassay; EMB = e-methylene blue; GNB = gram-negative bacillus; GNR = gram-negative rod; GPB = gram-positive bacillus; GPC = gram-positive cocci; GPR = gram-positive rod; H2S = hydrogen sulfide; HE = Hektoen enteric; LA = latex agglutination; SM = Sorbitol-MacConkey; TCBS = thiosulfate-citrate-bile-sucrose; XLD = xylose-lysine-deoxycholate. | ||

