Overview of Pneumocystis jiroveci Pneumonia
Pneumocystis jiroveci pneumonia (PJP), formerly known as Pneumocystis carinii pneumonia (PCP), is the most common opportunistic infection in persons with HIV infection.
Pneumocystis first came to attention as a cause of interstitial pneumonia in severely malnourished and premature infants during World War II in Central and Eastern Europe. Before the 1980s, fewer than 100 cases of PJP were reported annually in the United States, occurring in patients who were immunosuppressed (eg, cancer patients receiving chemotherapy and solid-organ transplant recipients receiving immunosuppressants). In 1981, the Centers for Disease Control and Prevention reported PJP in 5 previously healthy homosexual men residing in the Los Angeles area.
P jiroveci is now one of several organisms known to cause life-threatening opportunistic infections in patients with advanced HIV infection worldwide. Well over 100,000 cases of PJP were reported in the first decade of the HIV epidemic in the United States in people with no other cause for immunosuppression.
While officially classified as a fungal pneumonia, PJP does not respond to antifungal treatment. Although a histopathologic demonstration of the organism is required for a definitive diagnosis (see Histologic Findings), treatment should not be delayed.  Treatment of PJP may be initiated before the workup is complete in severely ill high-risk patients. Treatment of PJP depends on the degree of illness at diagnosis, determined on the basis of the alveolar-arterial gradient. See the A-a Gradient calculator.
Antibiotics are primarily recommended for treatment of mild, moderate, or severe PJP. Trimethoprim-sulfamethoxazole (TMP-SMX) has been shown to be as effective as intravenous pentamidine and more effective than other alternative treatment regimens.  Corticosteroids are used as adjunctive initial therapy only in patients with HIV infection who have severe PJP. Preventive measures (eg, smoking cessation and chemoprophylaxis) can play an important role in disease management.
For other discussions on pneumonia,  see the following:
Microbiology of Pneumocystis jiroveci Pneumonia
Pneumocystis is a genus of unicellular fungi found in the respiratory tracts of many mammals and humans. Distinct genomic variability exists between host-specific members of the genus. The organism was first described in 1909 by Chagas and then a few years later by Delanöes, who ultimately named the organism in honor of Dr. Carini after isolating it from infected rats. Years later, Dr. Otto Jirovec and his group isolated the organism from humans, and the organism responsible for PJP was renamed after him. [4, 5]
The taxonomic classification of the Pneumocystis genus was debated for some time. It was initially mistaken for a trypanosome and then later for a protozoan. In the 1980s, biochemical analysis of the nucleic acid composition of Pneumocystis rRNA and mitochondrial DNA identified the organism as a unicellular fungus rather than a protozoan. Subsequent genomic sequence analysis of multiple genes including elongation factor 3, a component of fungi protein synthesis not found in protozoa, further supported this notion.
The organism is found in 3 distinct morphologic stages, as follows:
The trophozoite (trophic form), in which it often exists in clusters
The sporozoite (precystic form)
The cyst, which contains several intracystic bodies (spores)
Pathophysiology and Etiology of Pneumocystis jiroveci Pneumonia
Pneumocystis organisms are commonly found in the lungs of healthy individuals. Most children are believed to have been exposed to the organism by age 3 or 4 years, and its occurrence is worldwide. 
Transmission of Pneumocystis
Animal studies have suggested that Pneumocystis organisms are communicable; airborne transmission has been reported. Human evidence of this is provided by molecular analysis of Pneumocystis isolates obtained from groups of patients involved in hospital outbreaks. [7, 8]
Further evidence of human transmission has been found in cases of recurrent pneumonia in which the genotype of Pneumocystis organisms in the same person differed in prior episodes. Despite this, barrier precautions are not required for patients hospitalized with P jiroveci pneumonia (PJP) except to protect other patients with depressed immunity.
Development of PJP
Disease occurs when both cellular immunity and humoral immunity are defective. Once inhaled, the trophic form of Pneumocystis organisms attach to the alveoli. Multiple host immune defects allow for uncontrolled replication of Pneumocystis organisms and development of illness. Activated alveolar macrophages without CD4+ cells are unable to eradicate Pneumocystis organisms. Increased alveolar-capillary permeability is visible on electron microscopy.
Physiologic changes include the following:
Hypoxemia with an increased alveolar-arterial oxygen gradient
Impaired diffusing capacity
Changes in total lung capacity and vital capacity
Risk factors for PJP
Persons receiving long-term immunosuppressive regimens for connective-tissue disorders, vasculitides, or solid-organ transplantation (eg, heart, lung, liver, kidney) 
Persons with hematologic and nonhematologic malignancies, including solid tumors and lymphomas 
Persons with severe malnutrition
Epidemiology of Pneumocystis jiroveci Pneumonia
Before the widespread use of prophylaxis for P jiroveci pneumonia (PJP), the frequency of Pneumocystis infection in lung transplant patients alone was as high as 88%. Now, with the routine use of prophylaxis, PJP is very rare in solid-organ transplant patients and has significantly decreased in patients infected with HIV.
Prior to the widespread use of highly active antiretroviral therapy (HAART), PJP occurred in 70%-80% of patients with HIV infection. The frequency of PJP is decreasing with the use of PJP prophylaxis and HAART. PJP is still the most common opportunistic infection in patients with HIV infection. Patients with HIV infection are more prone to PJP recurrence than patients not infected with HIV.
In developing regions of the world, the prevalence of PJP was once thought to be much lower,  but studies have shown that the lower reported incidence is likely a failure to accurately diagnose PJP. An accurate diagnosis requires access to modern medical care, which is not available worldwide.
Currently, the frequency of documented Pneumocystis infection is increasing in Africa, with Pneumocystis organisms found in up to 80% of infants with pneumonia who have HIV infection. In sub-Saharan Africa, tuberculosis is a common co-infection in persons with PJP. 
Prognosis of Pneumocystis jiroveci Pneumonia
In patients with HIV infection, PJP once carried a mortality rate of 20%-40%, depending on disease severity at presentation. Currently, mortality rates of 10%-20% are reported. PJP is still a major cause of death in patients with AIDS in the United States.
In persons without HIV infection, PJP carries a worse prognosis  ; this has not changed significantly in the past 20 years. Mortality rates of 30%-50% have been documented in several large studies.
The prognosis of PJP is worse in patients who present with concurrent pulmonary disease, in patients who develop pneumothorax, and in patients who require mechanical ventilation. The higher mortality rate is likely a result of delayed diagnosis and delayed initiation of appropriate treatment.
Clinical Presentation of Pneumocystis jiroveci Pneumonia
The symptoms of P jiroveci pneumonia (PJP) are nonspecific. PJP in patients with HIV infection tends to run a more subacute indolent course and tends to present much later, often after several weeks of symptoms, compared with PJP associated with other immunocompromising conditions.  Symptoms of PJP include the following:
Progressive exertional dyspnea (95%)
Nonproductive cough (95%)
The physical examination findings of PJP are nonspecific and include the following:
Pulmonary symptoms: Pulmonary examination may reveal mild crackles and rhonchi but may yield normal findings in up to half of patients.
Additional findings in children with severe disease include cyanosis, nasal flaring, and intercostal retractions.
Although Pneumocystis infection rarely causes extrapulmonary manifestations, such findings may be present in patients receiving aerosolized pentamidine for prophylaxis or in patients with advanced HIV infection who are not taking any prophylaxis. They may also occur in the absence of lung involvement.
Based on most well-documented findings, Pneumocystis infection may present in almost any organ system, as follows:
Central nervous system
Bone marrow (may have necrosis with resultant pancytopenia)
Eyes (may have retinal cotton-wool spots)
Thyroid (may present as a rapidly enlarging thyroid mass)
A pathophysiologic process similar to acute respiratory distress syndrome (ARDS) may occur in patients with severe PJP.  These patients may require intubation. This greatly diminishes the prognosis.
Differential Diagnosis of Pneumocystis jiroveci Pneumonia
The differential diagnoses of P jiroveci pneumonia (PJP) include the following conditions: 
A lactic dehydrogenase (LDH) study is performed as part of the initial workup.  LDH levels are usually elevated (>220 U/L) in patients with P jiroveci pneumonia (PJP). They are elevated in 90% of patients with PJP who are infected with HIV. The study has a high sensitivity (78%-100%); its specificity is much lower because other disease processes can result in an elevated LDH level.
LDH levels appear to reflect the degree of lung injury. They should decline with successful treatment. Consistently elevated LDH levels during treatment may indicate therapy failure and a worse prognosis.
Quantitative PCR for pneumocystis may become useful in distinguishing between colonization and active infection, but these assays are not yet available for routine clinical use. 
In one study, patients with positive quantitative PCR but negative immunofluorescence for pneumocystis had a higher 1-year mortality but only in the context of systemic inflammatory conditions. There was no significant difference for patients with solid-organ or hematologic malignancy. 
β-D-Glucan (BDG) is a cell-wall component of many fungi, including Candida, Aspergillus, and Pneumocystis (but not the Zygomycetes). It has been shown to be a sensitive test to detect PJP in a meta-analysis of 12 studies assessing the sensitivity, specificity, and overall accuracy of the test. 
Chest radiography should be obtained in any immunocompromised patient with fever and/or respiratory signs or symptoms.  The chest radiographic findings may be normal in patients with early mild disease. Diffuse bilateral infiltrates extending from the perihilar region are visible in most patients with P jiroveci pneumonia (PJP). Less-common findings include patchy asymmetric infiltrates, pneumothorax, and pneumatoceles. A radiographically normal chest radiograph has also been described. Pleural effusions and intrathoracic adenopathy are rare.
Pneumothorax may also develop in patients using aerosolized pentamidine. Apical disease may also be found in patients using aerosolized pentamidine for prophylaxis, as shown in the image below.
Go to Imaging Pneumocystis Carinii Pneumonia for complete information on this topic.
High-resolution computed tomography (HRCT) scanning of chest is helpful when the chest radiography findings are equivocal. HRCT yields a high sensitivity for P jiroveci pneumonia (PJP) in patients with HIV infection.
The typical appearance is patchy areas of ground-glass attenuation with a background of interlobular septal thickening. Negative (normal or unchanged) CT scan findings alone do not rule out PJP (see the image below).
Go to Imaging Pneumocystis Carinii Pneumonia for complete information on this topic.
Other Noninvasive Tests
Pulmonary function tests
Pulmonary function tests should be obtained as part of the initial noninvasive workup in patients with suspected P jiroveci pneumonia (PJP). Results may demonstrate a decreased diffusion capacity of carbon monoxide (DLCO) of less than 75% predicted. Decreased DLCO has a high sensitivity (89%-100%) but poor specificity (53%). PJP is unlikely if DLCO is normal.
When combined with normal or unchanged HRCT findings, pulmonary function tests may be used to identify patients unlikely to have PJP; such patients may be managed with observation alone.
Pulse oximetry on room air should be measured in all patients. The oxygen saturation should be measured both at rest and with exertion. If any hypoxemia is found (O2 saturation < 90%), then an arterial blood gas (ABG) level should be obtained to evaluate the need for possible adjunctive corticosteroids.
The diagnosis of PJP should prompt consideration for HIV testing and other immune evaluations of lymphocytes and antibodies. If HIV testing is performed, appropriate pretest and posttest counseling guidelines must be followed.
Serum LDH may be elevated in patients with PJP.
If P jiroveci pneumonia (PJP) is strongly suspected, obtain a sputum sample by sputum induction for histopathologic testing. Pneumocystis organisms are frequently found in sputum induced by inhalation of a hypertonic saline solution. Sputum induction is the quickest and least-invasive method for definitively diagnosing PJP.  Expectorated sputum has a very low sensitivity and should not be submitted for diagnosis. Pneumocystis antigen detection assays on sputum may also be helpful but may have a low sensitivity.
The sensitivity of sputum induction varies widely (< 50% to >90%) and depends on proficiency in using the technique and the experience of the laboratory. Specificity is high (99%-100%). This study may be less sensitive in patients without HIV infection, as the immunodeficiency caused by HIV infection typically leads to a greater alveolar load of Pneumocystis organisms. It may also be less sensitive in patients receiving aerosolized pentamidine for prophylaxis.
Bronchoalveolar lavage (BAL) is the most common invasive procedure used to diagnose P jiroveci pneumonia (PJP). It has a diagnostic yield that exceeds 90% (and may be higher if multiple lobes are sampled).  BAL yields a lower sensitivity in patients receiving aerosolized pentamidine, in which case a transbronchial biopsy may be performed in conjunction with BAL. 
Obtain BAL if PJP is strongly suspected and the induced sputum sample findings are negative. BAL may be used in patients who are unable to cooperate with an induced sputum sample (eg, because of altered mental status). BAL may be less useful in cases of suspected PJP relapse. Consultation with a pulmonologist is required for BAL.
Open lung biopsy is the most invasive procedure and yields 100% sensitivity and specificity because it provides the greatest amount of tissue for diagnosis. However, this procedure is reserved for rare cases when bronchoscopy findings are nondiagnostic.
Because clinical and radiologic findings are not specific for PJP and because P jiroveci cannot be grown in vitro, histopathologic demonstration is necessary before a definitive diagnosis is established. The following are the staining techniques available for respiratory tract secretions.
Crystal violet, Giemsa, Diff-Quik, and Wright stain are used to detect both the trophozoite and cyst forms but not the cyst wall. Diff-Quik stain demonstrating P jiroveci is seen in the image below.
Methenamine silver, toluidine blue, and Gram-Weigert selectively stain the wall of Pneumocystis cysts. Silver Gram stain showing P jiroveci is seen in the image below .
Papanicolaou smear may demonstrate a foamy-appearing eosinophilic material surrounding Pneumocystis organisms (as seen in the image below).
Some facilities prefer to use direct immunofluorescence using monoclonal antibodies to detect Pneumocystis organisms because it may be more sensitive than histologic staining.
Treatment of PJP - General Considerations
While officially classified as a fungal pneumonia, P jiroveci pneumonia (PJP) does not respond to antifungal treatment. The treatment of choice is TMP-SMX, with second-line agents including pentamidine, dapsone (often in combination with pyrimethamine), or atovaquone. However, there are a few reports of successful caspofungin administration in PJP. Echinocandins such as caspofungin may be active against Pneumocystis based on their activity against the inclusion of (1-3)beta-D glucan into the fungal cell wall, but clinical data are lacking. Case reports suggest it may be worthy of consideration as a salvage treatment option in nonresponsive cases, and further research is clearly warranted. 
Although a histopathologic demonstration of the organism is required for a definitive diagnosis (see Histologic Findings), treatment should not be delayed. Treatment of PJP may be initiated before the workup is complete in severely ill high-risk patients.
Appropriate histopathologic testing may still be used to confirm a diagnosis of PJP after treatment is initiated. Endotracheal tube aspirates from severely ill patients on mechanical ventilation may be submitted for diagnosis. Pneumocystis organisms persist in the host for days to weeks after therapy is started, allowing time for completion of the appropriate workup.
Treatment of PJP depends on the degree of illness at diagnosis. Degree of illness is determined based on the alveolar-arterial gradient: mild (< 35 mm Hg), moderate/severe (35-45 mm Hg), or severe (>45 mm Hg). Severe disease is also indicated by a room air partial pressure of oxygen lower than 70 mm Hg. Treatment of extrapulmonary manifestations of PJP is the same as that for other pneumonias.
In patients without HIV infection, response to treatment should begin within 4-5 days. In patients infected with HIV, the treatment response typically takes longer but should occur within the first 8 days. If no response occurs within the expected time, an appropriate alternative regimen should be used. Adding additional PJP medications to a current regimen only increases the risk of adverse drug reactions without improving the likelihood of a good outcome. Up to 10% of mild-to-moderate PJP cases fail to respond to antibiotic treatment because of lack of drug efficacy.
All patients who require corticosteroids should be admitted to the hospital because of the risk of progressive respiratory compromise.
Because of increasing evidence of possible human transmission (see Pathophysiology and Etiology of PJP),  the CDC Hospital Infection Control Practice Advisory Committee has recommended that patients with PJP not have direct contact with other immunocompromised patients.
Antibiotics are primarily recommended for treatment of mild, moderate, or severe P jiroveci pneumonia (PJP). TMP-SMX has been shown to be as effective as intravenous pentamidine and more effective than other alternative treatment regimens. [2, 35] The parenteral route may be considered in patients who present with serious illness or in those with gastrointestinal side effects.
Thomas et al have reported that a lower dose of TMP-SMX (10 mg/kg/d) is effective for PJP associated with HIV infection and carries fewer side effects,  but this should not yet be taken as a recommendation. Recent guidelines have been published. 
TMP-SMX is the preferred initial therapy during pregnancy according to consensus guidelines. The patient’s neonatologist should be informed if the medication is used near delivery because of potential for hyperbilirubinemia and kernicterus. For the treatment of infections that are resistant to TMP-SMX, the combination of clindamycin and primaquine is likely to be more effective than intravenous pentamidine. [38, 39]
The recommended duration of treatment for PJP is 21 days in patients with HIV infection and 14 days in all other patients. Patients infected with HIV tend to have a higher organism burden and respond to treatment slower than patients without HIV infection and therefore require a longer duration of therapy.
Adjunctive Corticosteroid Therapy
Corticosteroids are used as adjunctive initial therapy only in patients with HIV infection who have severe P jiroveci pneumonia (PJP) as defined by a room air arterial oxygen pressure of less than 70 mm Hg or an arterial-alveolar O2 gradient that exceeds 35 mm Hg. Adjunctive steroids are not recommended in patients without HIV infection.
Microbial degradation and clearance may trigger further inflammation, which can provoke a severe inflammatory response in the lungs that often worsens after therapy is begun. Adjunctive corticosteroid therapy can blunt this inflammatory response, reduce deterioration of oxygenation, and reduce the incidence of respiratory failure. [40, 41]
Further Outpatient Care
Arranging close medical follow-up with a primary care provider upon hospital discharge is essential to monitor resolution of disease and to initiate prophylactic medication (see Prevention of PJP).
Oral therapy with TMP-SMX has been shown to be very effective in the outpatient setting. However, oral therapy should be considered only in patients with mild-to-moderate P jiroveci pneumonia (PJP) who have reliable outpatient follow-up care.
Prevention of PJP
Smoking cessation is strongly recommended in patients with HIV infection, as studies have shown that, in addition to the common deleterious effects of tobacco use, smokers are at an increased risk of P jiroveci pneumonia (PJP) and have a more complicated treatment course. 
Chemoprophylaxis in patients with HIV Infection
Two types of outpatient chemoprophylactic therapies exist. Primary prophylaxis is used in immunocompromised patients without a history of PJP. Secondary prophylaxis is used in patients with a prior bout of PJP.
An expert panel overseen by the US Public Health Service and Infectious Disease Society of America has published guidelines on prophylaxis against P jiroveci pneumonia (PJP) in adult and pediatric patients with HIV infection. Chemoprophylaxis is recommended for the following groups:
Adults, adolescents, and pregnant patients with a CD4 count of less than 200/µL, oropharyngeal candidiasis, unexplained fever exceeding 100°F (37.7° C) for more than 2 weeks, and a prior episode of PJP regardless of CD4 count should receive prophylaxis.
Children born to mothers with HIV infection should receive prophylaxis with TMP-SMX beginning at age 4-6 weeks, if HIV infection has not been "presumptively ruled out" by two negative HIV DNA PCRs (typically one at birth, with another after age 4 weeks). Many HIV-exposed newborns in the developed world with access to this kind of testing therefore may never need to start PJP prophylaxis.
Children born to mothers with HIV infection who have had 4 negative HIV DNA PCRs (with one after at least age 4 months) or a negative HIV antibody test after age 6 months can be definitively said to be HIV-uninfected, and PJP prophylaxis can be safely discontinued.
All children who are determined to be HIV-infected should receive prophylaxis through the first year of life, then as determined by age-specific CD4 levels.
Prophylaxis may be discontinued in patients with HIV infection whose CD4 count exceeds 200/µL for 3 consecutive months while on HAART. Prophylaxis should be restarted if the CD4 count drops below 200/µL. Prophylaxis should be continued for life in patients who developed PJP while their CD4 level exceeded 200/µL.
One study suggests that discontinuation of prophylaxis may be safe in patients with HIV and CD4 counts of 101-200 cells/μL and suppressed viral load. 
Chemoprophylaxis in patients without HIV infection
Unlike in patients with HIV infection, no specific PJP prophylaxis guidelines exist for immunocompromised patients without HIV infection. In general, chemoprophylaxis should be considered in any of the following patients:
Patients with an underlying primary immune deficiency (eg, severe combined immunodeficiency or hypogammaglobulinemia)
Patients with a persistent CD4 count less than 200/µL
Solid organ transplant recipients
Hematopoietic stem cell transplant (HSCT) recipients, with prophylaxis administered (1) for 6 months after engraftment months or (2) for more than 6 months after HSCT in those who are still receiving immunosuppressive therapy (eg, prednisone, cyclosporine) or who have chronic graft versus host disease
Patients receiving daily systemic corticosteroid therapy (at least 20 mg daily for at least 1 month)
Patients with cancer, vasculitides, or collagen vascular disorders and others receiving cytotoxic or immunosuppressive treatments such as cyclosporine or the purine analogs fludarabine or cladribine
TMP-SMX is the agent of choice for PJP prophylaxis in the absence of a contraindication. In patients who cannot tolerate TMP-SMX, other options include dapsone, dapsone plus pyrimethamine, atovaquone, and aerosolized pentamidine. Commonly used prophylactic regimens are discussed below.
For TMP-SMX, the normal dosage is one double-strength tablet (160 mg TMP to 800 mg SMX) daily. One single-strength tablet (80 mg TMP to 400 mg SMX) daily is also effective. Another alternative is one double-strength tablet 3 times per week. However, a daily-dosing regimen provides an additional benefit of cross protection against Toxoplasma gondii infection and other bacterial infections.
The use of TMP-SMX for long-term PJP prophylaxis does not seem to affect the rates of infection by drug-resistant organisms such as pneumococcus or Staphylococcus aureus. TMP-SMX resistance has been reported among some isolates of Pneumocystis. 
For dapsone, the dosage is 100 mg daily by mouth if it is administered alone. If dapsone is given with pyrimethamine (plus leucovorin), the dosage is 50 mg of dapsone daily by mouth with 50 mg of pyrimethamine weekly and 25 mg of leucovorin weekly. Dapsone with pyrimethamine (plus leucovorin) provides protection against T gondii infection, but not other bacterial infections.
For atovaquone, the dosage is 1500 mg by mouth once daily given with food. This agent has a low toxicity profile and is an alternative if the patient cannot tolerate TMP-SMX or dapsone. However, atovaquone is very expensive.
For aerosolized pentamidine, the normal dosage is 300 mg in 6 mL sterile water via Respirgard nebulizer every 4 weeks. This agent is better tolerated than dapsone or TMP-SMX. However, it is much more expensive and less effective than other prophylactic agents. Side effects include cough and bronchospasm. The potential for extrapulmonary Pneumocystis manifestations and apical lung disease exists. In addition, aerosolized pentamidine may diminish the diagnostic sensitivity of sputum induction and bronchoalveolar lavage.
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- Overview of Pneumocystis jiroveci Pneumonia
- Microbiology of Pneumocystis jiroveci Pneumonia
- Pathophysiology and Etiology of Pneumocystis jiroveci Pneumonia
- Epidemiology of Pneumocystis jiroveci Pneumonia
- Prognosis of Pneumocystis jiroveci Pneumonia
- Clinical Presentation of Pneumocystis jiroveci Pneumonia
- Differential Diagnosis of Pneumocystis jiroveci Pneumonia
- Laboratory Studies
- Chest Radiography
- Computed Tomography
- Other Noninvasive Tests
- Sputum Induction
- Invasive Procedures
- Histologic Findings
- Treatment of PJP - General Considerations
- Antibiotic Therapy
- Adjunctive Corticosteroid Therapy
- Further Outpatient Care
- Prevention of PJP
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