Yolk Sac Tumor (Endodermal Sinus Tumors, Primitive Endodermal Tumors) Pathology 

Updated: Dec 29, 2021
  • Author: Ximing J Yang, MD, PhD; Chief Editor: Liang Cheng, MD  more...
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Yolk sac tumors are germ cell tumors that resembles the yolk sac, allantois, and extraembryonic mesenchyme. They are also known as endodermal sinus tumors or primitive endodermal tumors. [1]



Yolk sac tumors (YSTs) can be seen in males and females, involving the testis, ovary, and other sites, such as the mediastinum. Yolk sac tumors (YSTs) of the testis are located in the testis parenchyma; they are observed in two forms or age groups: pure YST in young children and mixed type in adults.

Pure yolk sac tumor (YST) is the most common testicular neoplasm in prepubertal children, accounting for 30% of testicular germ cell tumors in this age group, with a median age of 1.5 years. In adults, yolk sac tumor (YST) presents as a component of mixed nonseminomatous germ cell tumor, with an age averaging 25-30 years. Yolk sac tumor (YST) components are present in 40-50% of nonseminomatous germ cell tumors in the adult testis. [2, 3]

In children, yolk sac tumors (YSTs) are more common in Asians than in white or Black persons. In adults, these tumors are more common in white individuals than in other races.



The etiology of yolk sac tumors (YSTs) is essentially unknown. It is speculated that hypermethylation of the RUNX3 gene promoter and overexpression of GATA-4, a transcription factor that regulates differentiation and function of yolk sac endoderm, may play important roles in the pathogenesis of yolk sac tumors (YSTs). [1, 4, 5] However, these hypotheses have not been validated as yet.


Clinical Features and Imaging

Signs and symptoms depend on the site of the yolk sac tumor (YST). [1] Children with testicular yolk sac tumors (YSTs) usually present with painless testicular masses, which are typically bulky lesions. Metastasis is uncommon at presentation, occurring in less than 10% of cases. [1] In adults, yolk sac tumors (YSTs) are associated with other germ cell components such as embryonal carcinoma, choriocarcinoma, teratoma, and seminoma as a part of a mixed germ cell tumor. No specific symptoms except testicular mass are present.

Patients with ovarian yolk sac tumors (YSTs) may present with abdominal distention and sudden onset of pain; these tumors tend to grow very rapidly and metastasize, particularly to structures around the ovaries as well as via the lymph nodes. [1] There may be a palpable pelvic mass on physical examination.

Almost all the patients with a yolk sac tumor (YST), either in pure form or mixed form have a significantly elevated serum alpha fetoprotein (AFP).

The presence of hair, bone, or cartilage (the elements of a teratoma) can be seen in a testicular mass in adults by radiographic examination, which may or may not be associated with yolk sac tumor (YST) components. The radiographic findings are specific for malignant mixed germ cell tumors but are not specific for yolk sac tumors (YSTs).

Li et al investigate computed tomography (CT) findings of yolk sac tumors with pathological correlation. The study concludes that YST usually appears as a large solid-cystic mass with intratumoral hemorrhage, capsular tear, marked heterogeneous enhancement, and enlarged intratumoral vessels on CT images. Intratumoral calcification and fatty tissue, although rare, may indicate a mixed YST containing teratoma component. [6]


Gross Findings

Grossly, yolk sac tumors (YSTs) are solid gray-white with a gelatinous, myxoid, or mucoid appearance. [1] Necrosis, cystic changes, and hemorrhage are often seen. In adults, the gelatinous appearance of these tumors is mingled with the gross findings of the other germ cell tumor components; therefore, the overall appearance of a yolk sac tumor (YST) is heterogeneous.


Microscopic Findings

Yolk sac tumor (YST) of the testis is composed of primitive tumor cells, [1] which are relatively small and less pleomorphic relative to those in embryonal carcinoma, another common subtype of malignant germ cell tumor of the testis.

YST cells may form many histologic patterns resembling embryonal structures. The most common pattern seen in the majority cases of these tumors is microcystic structure, which is characterized by the presence of a spider-weblike network formed by vacuolated cytoplasm of tumor cells, similar to a honeycomb (see the image below). [1]

Yolk Sac Tumor Pathology. Microcystic pattern of y Yolk Sac Tumor Pathology. Microcystic pattern of yolk sac tumors. The tumor cells form a network connected by cytoplasm.

Other patterns include endodermal sinus (perivascular), papillary, solid, glandular, festoon, myxomatous, sarcomatoid, macrocytic, polyvesicular, hepatoid, and parietal. These patterns do not relate to prognosis but can cause difficulty in distinguishing yolk sac tumors (YSTs) from other tumors or other subtypes of germ cell tumors. [2]

The endodermal sinus pattern consists of a central vessel rimmed by fibrous tissue, surrounded by malignant epithelial cells in a cystic space which is lined by flattened tumor cells. This endodermal sinuslike structure is called a Schiller-Duvall body and is pathognomonic of yolk sac tumors (YSTs) (see the following image); however, Schiller-Duvall bodies are present only in 50-75% of these tumors. [1]

Yolk Sac Tumor Pathology. Schiller-Duvall body. A Yolk Sac Tumor Pathology. Schiller-Duvall body. A Schiller-Duvall body is a structure resembling the endodermal sinus, characterized by the presence of a central vessel, surrounded by fibrous tissue and epithelial tumor cells, in a space lined by flat tumor cells.

Hyaline globules ranging from 1 to 50 microns can be seen in yolk sac tumors (YSTs), which are periodic acid-Schiff stain (PAS) positive and diastase-resistant. Occasionally, the hyaline globules can be positive for AFP. Eosinophilic bands (extracellular basement membrane material) are frequent findings in yolk sac tumors (YSTs). Either hyaline globules or eosinophilic bands are specific for these tumors.



Yolk sac tumor (YST) cells are positive for AFP, which can be detected on tissue sections as well as in the serum of the patients with these tumors. [7] However, AFP is not specific for yolk sac tumors (YSTs), as other tumors such as hepatocellular carcinoma and hepatoblastoma can also be positive for APF. [8] Cytokeratin is present in almost all the cases, and vimentin can be positive in spindle cell patterns. Approximately 40-80% of cases of yolk sac tumors (YSTs) are positive for placental alkaline phosphatase (PLAP), a marker of several different subtypes of germ cell tumors.

In the past few years, other markers of yolk sac tumors (YSTs) have been reported. A promising marker that has been identified is glypican 3, which is a membrane-bound heparan sulfate proteoglycan. As a marker for yolk sac tumors (YSTs), glypican 3 is more sensitive but less specific than AFP, as glypican 3 can be detected in choriocarcinoma (which will be discussed in a separate pathology article) and a small percentage of immature teratomas, in addition to liver cancers. [9]

Shojaei et al investigated the expression of four divergent endodermal lineage markers, TTF-1, CDX2, Hep Par 1, and Napsin A, in gonadal and extra-gonadal yolk sac tumors. They studied 26 cases (5 ovarian, 15 testicular, and 6 extra-gonadal) containing yolk sac tumor as identified by typical histology and confirmed by positive immunohistochemical staining for alpha-fetoprotein and glypican-3. TTF-1 and CDX2 expression was mainly observed in reticular/cystic and glandular areas; Hep Par 1 was most frequently observed in myxoid/solid and glandular areas. [10]

Xiao et al investigated the immunohistochemical expression and diagnostic utility of the zinc finger and BTB domain containing 16 (ZBTB16) in 67 adult germ cell tumors. They found that ZBTB16 is a highly sensitive and specific marker for yolk sac tumor. The sensitivity and specificity of ZBTB16 in the detection of yolk sac tumor among the germ cell tumors was 100% and 96%, respectively. [11]



Chromosomal changes

The loss of the short arm of chromosome 1 (1p36) and the long arm of chromosome 6 (6q) as well as gain of the long arm of chromosomes 1 and 20 have been reported in yolk sac tumors (YSTs). In addition, isochromosome 12p, which is characteristic of other malignant testicular germ cell tumors, can be detected.

Expression signature

There is limited information in the literature regarding the gene expression signatures of yolk sac tumors (YSTs). However, a few papers have demonstrated the molecular signature of these tumors based on expression from microarrays studies. [12]


Tumor Spread and Staging

Of children with yolk sac tumors (YSTs), 80-90% of the tumors are stage I disease. The presence of a yolk sac tumor (YST) component in stage I tumors has been associated with decreased likelihood of occult metastasis.


Prognosis and Predictive Factors

Without treatment, this tumor is highly aggressive in children and will lead to death. With a combination of modern surgical treatment and adjuvant chemotherapy (cisplatin-based), survival in those with yolk sac tumors (YSTs) is greater than 90%. The prognosis of a malignant germ cell tumor in adults with a YST component is dependent on the response of the YST as well as other components to therapy.

Age at diagnosis is not a predictive factor in yolk sac tumors (YSTs), but the degree of AFP elevation, in addition to other serum tumor markers in mixed germ cell tumors, has been shown to correlate with prognosis. For serum AFP, levels < 1000 ng/mL are in the good prognostic category, levels >10,000 ng/mL are in the poor prognostic category, and those in between these levels are associated with an intermediate prognosis. Stage is also an important prognostic factor; early detection of lower stage disease will result in better prognosis .



Embryonal carcinoma (EC) should be distinguished from yolk sac tumors (YSTs), because EC is more pleomorphic, and lacks the special patterns of YST.

Seminoma should be distinguished from the solid pattern of yolk sac tumors (YSTs). Seminoma cells are bigger that YST cells, with lymphocytic infiltrates.

Juvenile granulosa cell tumor (JGCT) should be distinguished from yolk sac tumors (YSTs) because of their morphologic similarities. JGCT is seen female children younger than 5 months old. Although microcystic patterns can be seen in JGCT, the other patterns of YST cannot be found in JGCT.